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Quality · Compliance · Traceability

Quality and accreditations

A laboratory with 48 years of history, current ISO 9001:2015, variant classification under ACMG/AMP 2015 guidelines, and pipelines validated against GIAB references.

Certifications and standards

ISO 9001:2015

Quality management system audited annually. Applies to sample reception, extraction, sequencing, analysis and report issue.

ACMG/AMP 2015

Variant classification into 5 classes (pathogenic, likely pathogenic, VUS, likely benign, benign) according to ACMG/AMP criteria.

GDPR

Full compliance with the General Data Protection Regulation. Anonymisation from receipt. Servers located in the EU.

GATK Best Practices pipelines

BWA-MEM + GATK4 (HaplotypeCaller, VQSR/CNN). Complemented with DeepVariant for cross-validation.

GIAB benchmarking

Pipelines validated against Genome in a Bottle samples (HG001–HG005). F1-score > 0.995 for SNVs in clinical regions.

Guaranteed minimum coverage

≥20x in 99 % of the target clinical region. Any region below that is explicitly reported.

Process controls

Reception and sample QC

Chain-of-custody check, tube integrity control and DNA concentration measurement with Qubit + TapeStation.

Library preparation

Validated protocols with positive/negative controls per batch. Individual per-sample traceability in LIMS.

Sequencing

Q30 > 90 % on all lanes. Cross-contamination and sample-swap controls using genetic fingerprinting.

Analysis and review

Automated pipeline plus manual review by a clinical geneticist of every candidate finding. Double signature on diagnostic reports.

Need quality documentation?

For audits, agreements or competitive projects, we provide the certificates and validations that accredit our processes.

OmicaLabs